STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_09974Transmembrane protein. (134 aa)    
Predicted Functional Partners:
EGR_07312
Serine/threonine-protein phosphatase dullard-A.
   
 0.953
EGR_08369
Ubiquitin-like domain-containing CTD phosphatase.
   
 0.638
EGR_06484
CTD small phosphatase-like protein.
   
 0.634
EGR_03180
CTD small phosphatase-like protein 2.
   
 0.634
EGR_04186
Phosphatidate phosphatase LPIN2.
     
 0.616
EGR_03466
Phosphatidate phosphatase LPIN3.
     
 0.616
EGR_04725
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.515
EGR_04858
Uncharacterized protein.
    
 0.505
EGR_08520
RNA polymerase II subunit A.
    
 0.505
EGR_04528
Phosphatidylinositol transfer protein beta isoform.
     
 0.461
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.