STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_09149Uncharacterized protein. (1031 aa)    
Predicted Functional Partners:
EGR_02486
Maternal protein pumilio.
    
 
 0.586
EGR_04704
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.577
EGR_02816
Cold shock domain-containing protein.
    
 
 0.561
EGR_08130
ATP-dependent RNA helicase DDX3Y; Belongs to the DEAD box helicase family.
   
  
 0.540
EGR_02753
DNA polymerase sigma.
   
 
 0.532
EGR_00510
RNA-binding protein.
      
 0.530
EGR_04615
Nanos-type domain-containing protein; Belongs to the nanos family.
    
 
 0.489
EGR_01635
Nanos; Belongs to the nanos family.
    
 
 0.489
EGR_06706
Uncharacterized protein.
   
 
 0.409
EGR_04338
Lsm14b protein.
   
  
 0.408
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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