STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_09655Uncharacterized protein. (1088 aa)    
Predicted Functional Partners:
EGR_02636
Cullin-2; Belongs to the cullin family.
    
 0.935
EGR_10345
Transcription elongation factor b polypeptide 1; Belongs to the SKP1 family.
    
 0.829
EGR_03761
Transcription elongation factor B polypeptide 2.
    
 0.772
EGR_04378
RING-box protein.
    
 0.714
EGR_00753
RING-box protein.
    
 0.714
EGR_01284
NEDD8 protein.
    
 0.676
EGR_05227
COP9 signalosome complex subunit 6.
    
 0.675
EGR_08192
Cullin-associated NEDD8-dissociated protein.
   
 
 0.641
EGR_06763
DCN1-like protein.
    
 0.640
EGR_10716
Ankyrin repeat and KH domain-containing protein mask.
  
 0.630
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.