STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_09010Uncharacterized protein. (469 aa)    
Predicted Functional Partners:
EGR_05944
mRNA-decapping enzyme 1A.
    
 
 0.872
EGR_04147
Putative ATP-dependent RNA helicase DDX6.
   
 
 0.862
EGR_03463
ATP-dependent RNA helicase cgh-1.
   
 
 0.862
EGR_07346
Uncharacterized protein.
   
 
 0.681
EGR_07349
mRNA-decapping enzyme 2.
   
 
 0.681
EGR_02428
U6 snRNA-associated Sm-like protein LSm1.
    
 
 0.627
EGR_06342
Apolipoprotein A-I-binding protein.
    
 
 0.566
EGR_06343
YjeF N-terminal domain-containing protein.
    
 
 0.566
EGR_04181
RNA helicase.
   
 
 0.557
EGR_00227
Putative ATP-dependent RNA helicase DDX20.
   
 
 0.551
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.