STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_08650Defective pharyngeal development protein. (443 aa)    
Predicted Functional Partners:
EGR_01044
Serine/threonine-protein kinase PLK1.
      
 0.771
EGR_02827
Transcription factor GATA-6.
  
 0.764
EGR_03104
Erythroid transcription factor.
   
 0.665
EGR_05081
G2/mitotic-specific cyclin-B2; Belongs to the cyclin family.
      
 0.575
EGR_06849
Histone H2A; Belongs to the histone H2A family.
    
 0.545
EGR_02379
Histone arginine methyltransferase CARMER; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.519
EGR_02647
Uncharacterized protein.
    
 0.519
EGR_00424
WD_REPEATS_REGION domain-containing protein.
    
 0.519
EGR_07228
Homeobox protein EgHBX4.
   
 
 0.476
EGR_08416
Desert hedgehog protein.
     
 0.440
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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