STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_09084REST corepressor. (593 aa)    
Predicted Functional Partners:
EGR_08887
Lysine-specific histone demethylase.
   
 0.962
EGR_07661
Lysine-specific histone demethylase 1B.
   
 0.782
EGR_03052
Lysine-specific histone demethylase.
   
 0.775
EGR_04023
Chromodomain-helicase-DNA-binding protein.
   
 0.770
EGR_01057
Chromodomain-helicase-DNA-binding protein.
   
 0.720
EGR_05604
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.707
EGR_03724
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.707
EGR_08567
Histone deacetylase 8.
    
 0.681
EGR_00695
High mobility group protein 20A.
   
 0.677
EGR_04298
Uncharacterized protein.
   
 
 0.645
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.