STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_08139Putative splicing factor, arginine/serine-rich 7. (535 aa)    
Predicted Functional Partners:
EGR_00123
Splicing factor, arginine/serine-rich.
   
 0.912
EGR_09203
Polyadenylate-binding protein 2.
   
 0.895
EGR_02775
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.870
EGR_04826
Pre mRNA processing factor 17.
     
 0.870
EGR_04214
Splicing factor, arginine/serine-rich 4.
   
 0.868
EGR_06067
Pre-mRNA-splicing factor SLU7.
     
 0.865
EGR_09390
Myo inositol monophosphatase.
   
 
 0.865
EGR_00466
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.
    
  0.857
EGR_02105
Splicing factor, arginine/serine-rich 7.
   
 0.822
EGR_00522
RNA-binding protein with serine-rich domain.
   
 0.816
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.