STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_08811TPR_REGION domain-containing protein. (540 aa)    
Predicted Functional Partners:
EGR_02879
RNA polymerase-associated protein LEO1.
    
 0.933
EGR_00683
Long-chain fatty acid transport protein.
    
 0.684
EGR_02877
Telomerase protein component.
   
 0.677
EGR_04777
Intraflagellar transport protein.
    
 0.675
EGR_01542
RuvB-like helicase; Belongs to the RuvB family.
   
 0.651
EGR_02315
Intraflagellar transport protein 57.
   
 0.647
EGR_04593
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.643
EGR_07904
Uncharacterized protein.
   
 0.642
EGR_02921
Parafibromin.
    
 0.642
EGR_04617
Intraflagellar transport protein.
   
 0.641
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.