STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_07912NMDA receptor-regulated protein. (2608 aa)    
Predicted Functional Partners:
EGR_03101
N alpha acetyltransferase 50 NatE catalytic.
   
 
 0.991
EGR_00204
Acetyltransferase complex ARD1 subunit B.
   
 
 0.987
EGR_03546
Huntingtin-interacting protein K.
    
 
 0.921
EGR_06272
N-acetyltransferase.
   
 
 0.875
EGR_04618
Uncharacterized protein.
   
 
 0.875
EGR_00770
Phagocyte signaling-impaired protein.
   
  
 0.764
EGR_06637
Acetyltransferase B complex catalytic subunit NAA20.
   
 
 0.760
EGR_11118
N acetyltransferase mak3.
      
 0.743
EGR_07317
Bifunctional aminoacyl-tRNA synthetase.
   
   0.705
EGR_04062
N alpha acetyltransferase 35 natc auxiliary.
   
  
 0.676
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.