STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_07485Centromere/kinetochore protein. (1447 aa)    
Predicted Functional Partners:
EGR_06762
Neuroblastoma-amplified sequence.
    
 0.997
EGR_05799
RAD50-interacting protein.
   
 0.994
EGR_05337
Uncharacterized protein.
   
 0.994
EGR_00460
Ribosomal protein S6 kinase delta-1.
    
 0.977
EGR_05336
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
    
 0.950
EGR_10065
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
    
 0.900
EGR_02349
Coatomer subunit alpha.
    
 0.889
EGR_05309
Mitotic checkpoint protein BUB3.
    
 0.840
EGR_09056
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
   
 0.820
EGR_00330
Coatomer subunit beta.
   
 0.814
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.