STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_07006LAG1 longevity assurance. (1005 aa)    
Predicted Functional Partners:
EGR_07693
Sphingoid long chain base kinase 5.
     
 0.933
EGR_06715
Ceramide glucosyltransferase.
   
 
 0.932
EGR_06583
Neutral ceramidase.
     
 0.930
EGR_10190
Putative phosphatidate phosphatase.
    
 0.919
EGR_09388
Putative phosphatidate phosphatase.
    
 0.919
EGR_06452
LAG1 longevity assurance.
  
  
 
0.907
EGR_01291
Non-lysosomal glucosylceramidase.
     
 0.904
EGR_06717
Non-lysosomal glucosylceramidase.
     
 0.904
EGR_07977
LAG1 longevity assurance.
     
 
0.900
EGR_09746
Elongation of very long chain fatty acids protein.
   
 
 0.425
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.