STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_06269Minor histocompatibility antigen H13. (367 aa)    
Predicted Functional Partners:
EGR_04472
Protein TRC8.
   
 
 0.747
EGR_03373
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 
 0.732
EGR_04601
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.629
EGR_05758
Endoplasmin.
   
  
 0.625
EGR_02993
Translocon-associated protein subunit beta.
   
 
 0.613
EGR_00201
Protein transport protein Sec61 subunit alpha-like protein.
   
  
 0.609
EGR_05634
Translocon associated protein gamma subunit.
   
 
 0.604
EGR_01268
Signal peptidase complex subunit 1.
   
  
 0.551
EGR_03081
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 
 0.543
EGR_01021
Membrane-bound transcription factor site-2 protease.
      
 0.535
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.