STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_06723DNA-directed RNA polymerase I subunit RPA2; Belongs to the RNA polymerase beta chain family. (1082 aa)    
Predicted Functional Partners:
EGR_01630
DNA-directed RNA polymerases I and III subunit RPAC1.
  
 0.999
EGR_01963
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
  
 0.998
EGR_01823
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
  
 0.998
EGR_02567
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.997
EGR_03086
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
  
 0.997
EGR_09900
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.996
EGR_04064
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.996
EGR_03018
DNA-directed RNA polymerase I subunit RPA1.
 
 0.996
EGR_03019
DNA-directed RNA polymerase I subunit rpa1.
  
 0.995
EGR_02044
RNA polymerase I specific transcription initiation factor RRN3.
   
 0.994
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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