STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_06107Ubiquitin. (106 aa)    
Predicted Functional Partners:
EGR_02761
AN1-type zinc finger and ubiquitin domain-containing protein.
   
0.993
EGR_08474
E3 ubiquitin-protein ligase mind-bomb.
   
 0.993
EGR_06716
40S ribosomal protein S15-B; Belongs to the universal ribosomal protein uS19 family.
   
 0.993
EGR_08694
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.992
EGR_03298
60S ribosomal protein L14.
   
 0.991
EGR_04973
40S ribosomal protein S20.
   
 0.991
EGR_03127
40S ribosomal protein S17.
   
 0.991
EGR_04965
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.991
EGR_00625
Ubiquitin.
  
0.991
EGR_03038
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.991
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.