STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_05984N-acetyltransferase ESCO1. (231 aa)    
Predicted Functional Partners:
EGR_03169
Structural maintenance of chromosomes protein 3.
   
 0.987
EGR_05046
Sister chromatid cohesion protein PDS5 B.
   
 0.981
EGR_04599
Double-strand-break repair protein Rad.
   
 0.934
EGR_04874
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.913
EGR_07285
Structural maintenance of chromosomes protein.
   
 0.909
EGR_01118
Cohesin subunit.
   
 0.908
EGR_00114
Structural maintenance of chromosomes protein 1A.
   
 0.884
EGR_00115
Uncharacterized protein.
   
 0.884
EGR_04567
Structural maintenance of chromosomes protein.
   
 0.882
EGR_00275
Chromosome transmission fidelity protein.
   
 
 0.822
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.