STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_05370Protein cubitus interruptus. (1842 aa)    
Predicted Functional Partners:
EGR_06701
Suppressor of fused.
    
 0.981
EGR_08274
BTB and MATH domain-containing protein 43.
   
 0.966
EGR_04029
Kinesin-like protein KIF21B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.966
EGR_02951
Serine/threonine-protein kinase.
    
 0.907
EGR_06629
Smoothened.
    
 0.850
EGR_02418
Protein patched.
   
 0.823
EGR_04583
Cullin-3; Belongs to the cullin family.
    
 0.781
EGR_02921
Parafibromin.
    
 0.739
EGR_04421
cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily.
    
 0.725
EGR_06877
cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily.
    
 0.725
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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