STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_08425Tripartite motif-containing protein 3. (490 aa)    
Predicted Functional Partners:
EGR_11215
Ubiquitin.
   
 0.719
EGR_00261
40S ribosomal protein S27a.
    
 0.699
EGR_08951
Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.648
EGR_06107
Ubiquitin.
    
 0.571
EGR_00906
Ubiquitin-conjugating enzyme E2 L3.
   
 0.564
EGR_05250
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.536
EGR_02761
AN1-type zinc finger and ubiquitin domain-containing protein.
    
 0.524
EGR_00625
Ubiquitin.
    
  0.511
EGR_08474
E3 ubiquitin-protein ligase mind-bomb.
   
 0.507
EGR_00053
Ubiquitin-conjugating enzyme E2.
   
 0.507
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.