STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_08123Cathepsin L; Belongs to the peptidase C1 family. (134 aa)    
Predicted Functional Partners:
EGR_00222
Cathepsin B; Belongs to the peptidase C1 family.
  
 0.760
EGR_07173
Lysosomal aspartic protease; Belongs to the peptidase A1 family.
   
 0.757
EGR_02545
Exosome complex exonuclease RRP40.
   
 0.590
EGR_04531
Proactivator polypeptide.
   
 
 0.569
EGR_01840
Apoptotic protease-activating factor.
   
 0.546
EGR_03118
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.532
EGR_04104
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.516
EGR_05833
39S ribosomal protein L38.
   
 
 0.505
EGR_06636
Delta-like protein C.
   
 0.493
EGR_08815
Matrix metalloproteinase-25.
   
 0.490
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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