STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_05179Histone deacetylase complex subunit SAP18. (189 aa)    
Predicted Functional Partners:
EGR_00522
RNA-binding protein with serine-rich domain.
   
 0.993
EGR_06901
RNA and export factor-binding protein 2.
   
 
 0.976
EGR_00759
Sin3 histone deacetylase corepressor complex component.
     
 0.926
EGR_09726
Histone deacetylase complex subunit.
  
  
 
0.911
EGR_06873
Histone-binding protein RBBP4.
   
 
 0.882
EGR_01124
Uncharacterized protein.
   
 0.875
EGR_04285
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.857
EGR_09203
Polyadenylate-binding protein 2.
   
 0.809
EGR_00179
Paired amphipathic helix protein Sin3a.
    
 0.803
EGR_03121
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.771
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.