STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_04889Golgi reassembly-stacking protein 2. (477 aa)    
Predicted Functional Partners:
EGR_07287
Golgin subfamily A member 2.
    
 0.968
EGR_03563
General vesicular transport factor.
   
 0.943
EGR_04288
WD40 repeat-containing protein SMU1.
 
 
  
 0.906
EGR_01044
Serine/threonine-protein kinase PLK1.
   
 0.877
EGR_03928
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.867
EGR_06304
Syntaxin-5; Belongs to the syntaxin family.
    
 0.867
EGR_07288
Uncharacterized protein.
    
 0.858
EGR_07502
Sec1 family domain-containing protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.844
EGR_05336
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
    
 0.818
EGR_02294
Ras-related protein Rab-2A.
   
 0.816
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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