STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_0757339S ribosomal protein L23. (256 aa)    
Predicted Functional Partners:
EGR_02281
39S ribosomal protein L19.
   
 
 0.992
EGR_02926
39S ribosomal protein L13.
   
 
 0.992
EGR_03856
39S ribosomal protein L47.
   
 
 0.990
EGR_01631
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 
 0.989
EGR_00249
39S ribosomal protein L30.
   
   0.988
EGR_08414
Ribosomal protein L37 mitochondrial.
   
 
 0.987
EGR_05021
Putative 28S ribosomal protein S16.
   
 
 0.987
EGR_02830
28S ribosomal protein S2.
   
 
 0.984
EGR_03151
39S ribosomal protein L46 mitochondrial.
   
 
 0.980
EGR_06850
39S ribosomal protein L3.
   
 
 0.978
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.