STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_04605ADP-ribosylation factor GTPase-activating protein. (438 aa)    
Predicted Functional Partners:
EGR_05116
Arf-GAP domain-containing protein.
   
0.948
EGR_07626
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor.
    
 0.868
EGR_07111
Coatomer subunit beta.
    
 0.806
EGR_07611
Expressed conserved protein.
   
 0.801
EGR_05115
Uncharacterized protein.
   
 0.801
EGR_08271
ADP-ribosylation factor-like protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.786
EGR_02639
Coatomer subunit epsilon.
   
 0.777
EGR_04197
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.775
EGR_05336
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 
 0.773
EGR_00856
ADP-ribosylation factor.
    
 0.763
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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