STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_03564Tectonin beta-propeller repeat-containing protein. (1802 aa)    
Predicted Functional Partners:
EGR_09371
WD repeat domain phosphoinositide-interacting protein.
   
  
 0.781
EGR_05950
Autophagy-related protein.
      
 0.542
EGR_00117
Programmed cell death protein.
   
  
 0.542
EGR_03003
Maf-like protein.
      
 0.525
EGR_07050
Uncharacterized protein.
   
  
 0.505
EGR_05627
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
      
 0.480
EGR_03563
General vesicular transport factor.
 
  
 
 0.480
EGR_03981
Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
  
 0.448
EGR_00811
Vacuolar protein sorting-associated protein.
    
 
 0.432
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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