STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_03569Cytochrome oxidase biogenesis protein (Oxa1 mitochondrial). (337 aa)    
Predicted Functional Partners:
EGR_00201
Protein transport protein Sec61 subunit alpha-like protein.
   
 0.946
EGR_06639
Mitochondrial inner membrane protein OXA1L.
   
 
 0.745
EGR_05570
Immature colon carcinoma transcript 1 protein.
  
 
 0.720
EGR_02002
28S ribosomal protein S9.
  
   0.700
EGR_04705
Mitochondrial ribosomal protein L55.
    
 
 0.691
EGR_05036
ATP synthase lipid-binding protein; Belongs to the ATPase C chain family.
  
 
 0.689
EGR_07322
Mitochondrial ribosomal protein L4.
   
 
 0.678
EGR_00592
39S ribosomal protein L12.
   
 
 0.677
EGR_05021
Putative 28S ribosomal protein S16.
  
 
 0.674
EGR_07169
39S ribosomal protein L2.
   
 
 0.657
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.