STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_06834tRNA guanosine-2'-O-methyltransferase TRM11. (634 aa)    
Predicted Functional Partners:
EGR_02589
tRNA methyltransferase.
   
 0.985
EGR_06833
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
 
      0.900
EGR_05705
WD repeat-containing protein.
   
    0.857
EGR_00703
tRNA (Adenine-N(1)-)-methyltransferase catalytic subunit TRMT61A.
   
  
 0.824
EGR_03980
tRNA (Guanine-N(7)-)-methyltransferase subunit WDR4.
   
  
 0.816
EGR_05611
Alkylated DNA repair protein AlkB.
   
 
 0.814
EGR_03341
tRNA-dihydrouridine synthase 1-like protein.
  
  
 0.805
EGR_08601
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
 
 0.791
EGR_04500
Methyltransferase.
   
 
 0.787
EGR_08545
tRNA (Adenine-N(1)-)-methyltransferase non-catalytic subunit TRM6.
   
 
 0.782
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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