STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_05940Homeobox protein homothorax. (325 aa)    
Predicted Functional Partners:
EGR_01901
Homeobox protein extradenticle.
  
0.830
EGR_05941
Homeobox protein Meis1.
 
      0.661
EGR_03716
Protein tiptop.
   
 0.637
EGR_02331
Pre-B-cell leukemia transcription factor 4.
    
0.545
EGR_02330
Erythrocyte membrane protein.
    
 0.545
EGR_00065
Uncharacterized protein.
    
 0.520
EGR_08446
Homeobox protein Dlx1a.
    
 
 0.432
EGR_06326
Mab 21 protein.
   
 
 0.427
EGR_06766
Serum response factor.
   
 
 0.415
EGR_02112
Homeobox protein Hox-B7.
   
 0.408
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.