STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_01158Spermidine synthase; Belongs to the spermidine/spermine synthase family. (330 aa)    
Predicted Functional Partners:
EGR_05348
S-adenosylmethionine decarboxylase proenzyme.
    
 0.993
EGR_02752
Purine nucleoside phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.
  
 
 0.978
EGR_09306
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.949
EGR_06828
Nitrilase and fragile histidine triad fusion protein NitFhit.
 
 
 0.919
EGR_03941
Amine oxidase.
     
 0.918
EGR_01138
Beta-ureidopropionase.
  
 
 0.879
EGR_10218
Arginase.
  
 
 0.840
EGR_08582
Arginase.
  
 
 0.840
EGR_06681
Arginase.
  
 
 0.840
EGR_07058
Arginase; Belongs to the arginase family.
  
 
 0.831
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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