STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_01685F-box/LRR-repeat protein 2. (551 aa)    
Predicted Functional Partners:
EGR_02169
S-phase kinase-associated protein; Belongs to the SKP1 family.
    
 0.723
EGR_02171
S-phase kinase-associated protein; Belongs to the SKP1 family.
    
 0.723
EGR_07015
Cullin-1; Belongs to the cullin family.
    
 0.703
EGR_04583
Cullin-3; Belongs to the cullin family.
    
 0.618
EGR_01284
NEDD8 protein.
    
 0.574
EGR_08192
Cullin-associated NEDD8-dissociated protein.
     
 0.554
EGR_09155
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 
 0.545
EGR_02623
F-box only protein 32.
   
 
 0.491
EGR_02636
Cullin-2; Belongs to the cullin family.
    
  0.414
EGR_00534
F-box only protein.
   
 
 0.410
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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