STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_04228Glycogenin-1. (552 aa)    
Predicted Functional Partners:
EGR_02939
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.996
EGR_06038
1,4-alpha-glucan-branching enzyme.
   
 0.988
EGR_04232
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.926
EGR_01474
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.926
EGR_07321
DNA polymerase delta subunit 2.
   
 0.775
EGR_00175
DNA polymerase.
    
 0.771
EGR_06987
DNA polymerase.
    
 0.705
EGR_01999
Glycogen debranching enzyme.
   
 0.699
EGR_01998
Glycogen debranching enzyme.
   
 0.699
EGR_08477
CBM21 domain-containing protein.
   
 0.672
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.