STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_01186LAS1-like protein. (163 aa)    
Predicted Functional Partners:
EGR_00651
Rab5 GDP/GTP exchange factor.
   
 
 0.951
EGR_06624
Sentrin-specific protease.
   
 0.903
EGR_03549
Uncharacterized protein.
   
 0.902
EGR_08762
Putative rRNA-processing protein EBP2.
   
 
  0.762
EGR_01009
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
  0.762
EGR_05016
Guanine nucleotide-binding protein.
   
 
  0.747
EGR_00887
Centrosomal protein.
   
  0.733
EGR_03197
Ribosome biogenesis protein bop1.
   
  0.733
EGR_09981
U3 small nucleolar ribonucleoprotein IMP4.
   
 
  0.730
EGR_06438
Ribosome biogenesis protein WDR12.
   
 
  0.691
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.