STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00460Ribosomal protein S6 kinase delta-1. (809 aa)    
Predicted Functional Partners:
EGR_05799
RAD50-interacting protein.
   
 0.988
EGR_06762
Neuroblastoma-amplified sequence.
   
 0.979
EGR_07485
Centromere/kinetochore protein.
    
 0.977
EGR_05336
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
   
 0.843
EGR_08391
Leucine-rich repeat serine/threonine-protein kinase.
   
 0.830
EGR_08390
Leucine-rich repeat serine/threonine-protein kinase.
   
 0.830
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.715
EGR_01652
Syntaxin-10.
    
 
 0.700
EGR_03464
Kinesin-related motor protein Eg5; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.661
EGR_02278
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.643
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.