STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00563Bromodomain adjacent to zinc finger domain protein 2A. (2446 aa)    
Predicted Functional Partners:
EGR_07033
Putative global transcription activator SNF2L1.
    
 0.899
EGR_06014
Helicase domino.
    
 0.777
EGR_08888
DNA polymerase epsilon subunit 3.
    
 
 0.706
EGR_03616
DNA excision repair protein ERCC-6-like protein.
   
 0.623
EGR_03355
DNA ligase.
   
  
 0.616
EGR_07798
DNA excision repair protein ERCC-6.
    
 0.610
EGR_07672
Chromodomain-helicase-DNA-binding protein.
   
 0.601
EGR_05500
Chromodomain-helicase-DNA-binding protein.
   
 0.601
EGR_07172
Translin-associated factor X-interacting protein.
   
 0.590
EGR_06706
Uncharacterized protein.
   
 0.590
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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