STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_0024939S ribosomal protein L30. (316 aa)    
Predicted Functional Partners:
EGR_07573
39S ribosomal protein L23.
   
   0.988
EGR_02281
39S ribosomal protein L19.
   
 
 0.983
EGR_03856
39S ribosomal protein L47.
   
   0.981
EGR_05021
Putative 28S ribosomal protein S16.
   
 
 0.980
EGR_02926
39S ribosomal protein L13.
   
   0.979
EGR_02603
39S ribosomal protein L16 mitochondrial.
   
 0.977
EGR_04271
39S ribosomal protein L40.
   
 
 0.975
EGR_07322
Mitochondrial ribosomal protein L4.
   
 
 0.971
EGR_05264
39S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.963
EGR_03151
39S ribosomal protein L46 mitochondrial.
   
 
 0.959
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.