STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00259BTB/POZ domain-containing protein. (499 aa)    
Predicted Functional Partners:
EGR_04583
Cullin-3; Belongs to the cullin family.
   
 0.709
EGR_02296
Kelch-like protein.
    
  0.659
EGR_04079
COP9 signalosome complex subunit 2.
   
  0.609
EGR_07015
Cullin-1; Belongs to the cullin family.
   
 0.607
EGR_02738
COP9 signalosome complex subunit 3.
    
 0.601
EGR_00111
NEDD8-conjugating enzyme UBE2F; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.595
EGR_01372
COP9 signalosome complex subunit.
    
  0.589
EGR_06827
Leucine-rich repeat-containing protein 67.
    
  0.587
EGR_07170
NEDD8-activating enzyme E1 catalytic subunit.
   
 
  0.582
EGR_01857
COP9 signalosome complex subunit 8.
    
  0.579
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.