STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00289Poly(RC)-binding protein. (192 aa)    
Predicted Functional Partners:
EGR_00290
Poly(RC)-binding protein.
 
      0.783
EGR_03219
Heterogeneous nuclear ribonucleoprotein L.
   
 0.682
EGR_03657
Transformer-2 protein beta.
   
 0.670
EGR_06368
Heterogeneous nuclear ribonucleoprotein K.
   
0.666
EGR_07702
Nuclear cap-binding protein subunit 2.
    
 0.651
EGR_04403
Nuclear cap-binding protein subunit.
   
 0.638
EGR_06870
Heterogeneous nuclear ribonucleoproteins C1/C2.
   
 0.604
EGR_03357
Polypyrimidine tract-binding protein.
   
 0.594
EGR_05918
Splicing factor, arginine/serine-rich.
   
 0.593
EGR_04214
Splicing factor, arginine/serine-rich 4.
   
 0.563
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.