STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00985Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (164 aa)    
Predicted Functional Partners:
EGR_09353
SNW domain-containing protein.
    
 0.989
EGR_07536
Pre-mRNA-splicing factor SYF2.
 
  
 0.986
EGR_04826
Pre mRNA processing factor 17.
    
 0.983
EGR_09672
Cell division cycle 5-related protein.
   
 
 0.965
EGR_08471
U5 small nuclear ribonucleoprotein component.
  
 0.961
EGR_05260
Pre-mRNA-processing-splicing factor 8.
   
 0.952
EGR_04047
Pre-mRNA-processing factor.
    
 0.947
EGR_00091
CWF19-like protein.
   
  0.935
EGR_00567
Protein-S-isoprenylcysteine O-methyltransferase.
  
 
0.934
EGR_05248
Peptidylprolyl isomerase.
 
 0.933
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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