STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00125rRNA 2'-O-methyltransferase fibrillarin. (1101 aa)    
Predicted Functional Partners:
EGR_04401
Nucleolar protein 56.
   
 0.999
EGR_00541
Nucleolar protein.
   
 0.999
EGR_06172
U3 small nucleolar RNA-interacting protein 2.
   
 0.998
EGR_05800
H/ACA ribonucleoprotein complex subunit 4.
   
 
 0.997
EGR_01661
Nucleolar protein 6.
   
 0.997
EGR_07532
H/ACA ribonucleoprotein complex subunit 2-like protein.
   
 0.996
EGR_06653
U3 small nucleolar RNA-associated protein 4.
   
 0.995
EGR_03574
Nucleolar protein 5A.
   
 0.994
EGR_06896
Bystin.
   
 
 0.993
EGR_00636
Periodic tryptophan protein.
   
 
 0.993
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.