STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00400DCC-interacting protein 13-beta. (514 aa)    
Predicted Functional Partners:
EGR_01000
Ras-related protein Rab-5B.
   
 
 0.991
EGR_02613
RAC serine/threonine-protein kinase.
    
 
 0.991
EGR_00874
Ras-related protein RabJ.
   
 
 0.991
EGR_07679
Intersectin-1.
   
 0.971
EGR_04133
Caspase-2; Belongs to the peptidase C14A family.
    
 0.966
EGR_08620
Reticulocyte-binding protein 2 a.
    
 0.966
EGR_05059
Caspase-3; Belongs to the peptidase C14A family.
    
 0.966
EGR_04745
Caspase-3; Belongs to the peptidase C14A family.
    
 0.966
EGR_03235
Uncharacterized protein.
   
 0.962
EGR_08298
PDZ domain-containing protein GIPC1.
   
 
 0.961
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.