STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_06948Homeobox protein Hox-A3a. (131 aa)    
Predicted Functional Partners:
EGR_01901
Homeobox protein extradenticle.
    
 0.558
EGR_02331
Pre-B-cell leukemia transcription factor 4.
    
 0.556
EGR_02330
Erythrocyte membrane protein.
    
 0.556
EGR_00014
Homeobox protein Hox-B4a.
  
  
0.531
EGR_01311
Homeobox protein abdominal-A.
   
  
0.512
EGR_01312
Uncharacterized protein.
   
  
 0.512
EGR_02118
Homeobox protein Hox-A10a.
    
 
0.463
EGR_01310
Homeobox protein abdominal-B.
    
 
0.463
EGR_05526
Nuclear receptor subfamily 5 group A member.
    
 0.434
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.