STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_01315Myoferlin. (1927 aa)    
Predicted Functional Partners:
EGR_01316
Dysferlin.
 
      0.892
EGR_05121
LAM_G_DOMAIN domain-containing protein.
      
 0.473
EGR_09625
Rpgr-interacting protein 1 related.
      
 0.465
EGR_06654
Vesicular glutamate transporter.
     
 0.446
EGR_06655
MFS transporter, ACS family, solute carrier family.
     
 0.446
EGR_08714
Sulfate anion transporter.
   
  
 0.442
EGR_05754
Potassium voltage-gated channel subfamily KQT member 5; Belongs to the potassium channel family.
   
  
 0.440
EGR_03921
Vesicle-associated membrane protein 2.
     
 0.424
EGR_07769
Cysteine desulfurase.
      
 0.410
EGR_06941
Synaptotagmin-11.
   
  
 0.403
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.