STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_06268Heterogeneous nuclear ribonucleoprotein F. (468 aa)    
Predicted Functional Partners:
EGR_04776
Heterogeneous nuclear ribonucleoprotein U-like protein.
   
 0.844
EGR_07131
Myelin expression factor 2.
   
 0.806
EGR_00123
Splicing factor, arginine/serine-rich.
   
 0.802
EGR_06368
Heterogeneous nuclear ribonucleoprotein K.
   
 0.782
EGR_08139
Putative splicing factor, arginine/serine-rich 7.
   
 0.766
EGR_05918
Splicing factor, arginine/serine-rich.
   
 0.765
EGR_03219
Heterogeneous nuclear ribonucleoprotein L.
   
 0.765
EGR_07702
Nuclear cap-binding protein subunit 2.
   
 0.756
EGR_04214
Splicing factor, arginine/serine-rich 4.
   
 0.756
EGR_03657
Transformer-2 protein beta.
   
 0.753
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.