STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_06056ATPase family AAA domain-containing protein 3-B. (635 aa)    
Predicted Functional Partners:
EGR_06739
Putative complex I intermediate-associated protein 30.
    
   0.756
EGR_02244
Prohibitin.
   
 
 0.616
EGR_02788
Evolutionarily conserved signaling intermediate in Toll pathway.
   
   0.615
EGR_02787
Evolutionarily conserved signaling intermediate in Toll pathway.
   
   0.615
EGR_06319
Prohibitin.
   
 
 0.601
EGR_08170
V-type proton ATPase subunit H.
   
  
 0.583
EGR_03582
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.570
EGR_05289
Cell division protein kinase 5; Belongs to the protein kinase superfamily.
   
  
 0.542
EGR_05811
Cyclin-T1.
   
  
 0.541
EGR_06417
Translocator protein.
      
 0.535
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.