STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00091CWF19-like protein. (595 aa)    
Predicted Functional Partners:
EGR_04826
Pre mRNA processing factor 17.
   
 0.988
EGR_08471
U5 small nuclear ribonucleoprotein component.
    
 
 0.957
EGR_04047
Pre-mRNA-processing factor.
    
   0.954
EGR_09672
Cell division cycle 5-related protein.
    
   0.953
EGR_00985
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.935
EGR_07536
Pre-mRNA-splicing factor SYF2.
    
 0.932
EGR_05260
Pre-mRNA-processing-splicing factor 8.
    
 
 0.928
EGR_01892
Pre-mRNA-splicing factor SYF1.
    
 
 0.889
EGR_04348
Peptidyl-prolyl cis-trans isomerase E.
   
  0.878
EGR_06776
U2 small nuclear ribonucleoprotein A.
    
 
 0.871
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.