STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00336Scavenger mRNA-decapping enzyme DcpS. (609 aa)    
Predicted Functional Partners:
EGR_00883
NADPH dependent diflavin oxidoreductase 1.
      
 0.575
EGR_05781
5'-3' exoribonuclease 2.
   
  
 0.555
EGR_05944
mRNA-decapping enzyme 1A.
      
 0.537
EGR_07346
Uncharacterized protein.
   
  
 0.474
EGR_07349
mRNA-decapping enzyme 2.
   
  
 0.474
EGR_06850
39S ribosomal protein L3.
      
 0.433
EGR_01683
Survival of motor neuron protein-interacting protein.
   
  
 0.423
EGR_04688
Zinc finger protein 207.
      
 0.412
EGR_06342
Apolipoprotein A-I-binding protein.
   
  
 0.410
EGR_06343
YjeF N-terminal domain-containing protein.
   
  
 0.410
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.