STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_03840Alkaline phosphatase, tissue-nonspecific isozyme; Belongs to the alkaline phosphatase family. (519 aa)    
Predicted Functional Partners:
EGR_05047
GTP cyclohydrolase I.
   
 
  0.901
EGR_07892
6-pyruvoyl tetrahydrobiopterin synthase.
     
  0.900
EGR_01375
Thiamin pyrophosphokinase 1.
     
  0.900
EGR_06761
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 
 0.648
EGR_04234
NAD kinase.
   
 
  0.637
EGR_04043
Glycerophosphodiester phosphodiesterase gde1.
  
 0.530
EGR_01535
Thyroid receptor-interacting protein.
   
 0.467
EGR_08262
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
   
 
  0.451
EGR_07260
Adenosine deaminase.
   
 
  0.449
EGR_09975
Transketolase.
   
 
 0.432
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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