STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_03448Uncharacterized protein. (1021 aa)    
Predicted Functional Partners:
EGR_01068
Uncharacterized protein.
    
 0.997
EGR_02427
Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family.
   
 0.979
EGR_07898
Uncharacterized protein.
     
 0.824
EGR_01371
Telomerase-binding protein EST1A.
     
 0.819
EGR_02536
Uncharacterized protein.
     
 0.787
EGR_05944
mRNA-decapping enzyme 1A.
   
 
 0.762
EGR_00240
Target of rapamycin; Belongs to the PI3/PI4-kinase family.
   
 0.737
EGR_06214
DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.
   
 0.732
EGR_00533
Regulator of nonsense transcripts.
   
  
 0.657
EGR_05727
Regulator of nonsense transcripts.
    
 
 0.614
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.