Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGR_02792 | EGR_02847 | W6V7A7 | U6J7Y4 | Splicing factor 3A subunit. | Splicing factor 3B subunit 3. | 0.988 |
EGR_02792 | EGR_03212 | W6V7A7 | W6V6D8 | Splicing factor 3A subunit. | Putative ATP-dependent RNA helicase DDX46. | 0.992 |
EGR_02792 | EGR_03345 | W6V7A7 | W6V5Z6 | Splicing factor 3A subunit. | PHD finger-like domain-containing protein 5A. | 0.971 |
EGR_02792 | EGR_03685 | W6V7A7 | W6UIR6 | Splicing factor 3A subunit. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.966 |
EGR_02792 | EGR_03864 | W6V7A7 | U6JEK1 | Splicing factor 3A subunit. | Splicing factor 3B subunit 2. | 0.988 |
EGR_02792 | EGR_06770 | W6V7A7 | U6JNJ9 | Splicing factor 3A subunit. | Splicing factor 3A subunit 3. | 0.999 |
EGR_02792 | EGR_06776 | W6V7A7 | W6UXR7 | Splicing factor 3A subunit. | U2 small nuclear ribonucleoprotein A. | 0.989 |
EGR_02792 | EGR_06843 | W6V7A7 | U6JHU4 | Splicing factor 3A subunit. | Splicing factor 3B subunit 4. | 0.992 |
EGR_02792 | EGR_08769 | W6V7A7 | U6JIC2 | Splicing factor 3A subunit. | Splicing factor 3A subunit 2. | 0.999 |
EGR_02792 | EGR_09024 | W6V7A7 | U6JDZ5 | Splicing factor 3A subunit. | HIV Tat specific factor 1. | 0.807 |
EGR_02847 | EGR_02792 | U6J7Y4 | W6V7A7 | Splicing factor 3B subunit 3. | Splicing factor 3A subunit. | 0.988 |
EGR_02847 | EGR_03212 | U6J7Y4 | W6V6D8 | Splicing factor 3B subunit 3. | Putative ATP-dependent RNA helicase DDX46. | 0.983 |
EGR_02847 | EGR_03345 | U6J7Y4 | W6V5Z6 | Splicing factor 3B subunit 3. | PHD finger-like domain-containing protein 5A. | 0.999 |
EGR_02847 | EGR_03685 | U6J7Y4 | W6UIR6 | Splicing factor 3B subunit 3. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.957 |
EGR_02847 | EGR_03864 | U6J7Y4 | U6JEK1 | Splicing factor 3B subunit 3. | Splicing factor 3B subunit 2. | 0.999 |
EGR_02847 | EGR_06770 | U6J7Y4 | U6JNJ9 | Splicing factor 3B subunit 3. | Splicing factor 3A subunit 3. | 0.993 |
EGR_02847 | EGR_06776 | U6J7Y4 | W6UXR7 | Splicing factor 3B subunit 3. | U2 small nuclear ribonucleoprotein A. | 0.991 |
EGR_02847 | EGR_06843 | U6J7Y4 | U6JHU4 | Splicing factor 3B subunit 3. | Splicing factor 3B subunit 4. | 0.999 |
EGR_02847 | EGR_08769 | U6J7Y4 | U6JIC2 | Splicing factor 3B subunit 3. | Splicing factor 3A subunit 2. | 0.991 |
EGR_02847 | EGR_09024 | U6J7Y4 | U6JDZ5 | Splicing factor 3B subunit 3. | HIV Tat specific factor 1. | 0.866 |
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