STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_02857PDZ and LIM domain protein. (284 aa)    
Predicted Functional Partners:
EGR_01453
Vinculin.
   
 0.657
EGR_01421
Catenin alpha-1.
   
 0.653
EGR_05827
Focal adhesion kinase.
    
 0.582
EGR_05826
Focal adhesion kinase.
    
 0.582
EGR_00087
Alpha-parvin.
   
 0.570
EGR_06059
Alpha-parvin.
   
 0.570
EGR_02997
Adapter molecule Crk.
    
 0.553
EGR_03922
Integrin beta.
    
 0.535
EGR_05954
Alpha-actinin-2.
   
 
 0.528
EGR_06344
Talin-1.
   
 0.512
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.