STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00594DNA-binding protein HEXBP. (293 aa)    
Predicted Functional Partners:
EGR_08470
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.634
EGR_01636
40S ribosomal protein S11.
   
 
 0.597
EGR_02819
28S ribosomal protein S5 mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.578
EGR_08694
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.578
EGR_00633
Small nuclear ribonucleoprotein Sm D3.
   
 0.576
EGR_09626
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.565
EGR_01591
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.563
EGR_09971
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.554
EGR_03906
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.548
EGR_06716
40S ribosomal protein S15-B; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.542
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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