STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGR_00028WD repeat-containing protein. (1319 aa)    
Predicted Functional Partners:
EGR_03780
Uncharacterized protein.
     
 0.702
EGR_05332
Uncharacterized protein.
   
    0.696
EGR_02878
N alpha acetyltransferase 40 NatD catalytic.
    
   0.556
EGR_01043
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 
 0.541
EGR_08391
Leucine-rich repeat serine/threonine-protein kinase.
   
 
 0.512
EGR_08390
Leucine-rich repeat serine/threonine-protein kinase.
   
 
 0.512
EGR_08886
Charged multivesicular body protein 6.
    
 
 0.510
EGR_06891
Enkurin domain-containing protein.
      
 0.461
EGR_03082
Ankyrin repeat family A protein 2.
     
 0.420
EGR_03343
Tubulin-specific chaperone D.
      
 0.404
Your Current Organism:
Echinococcus granulosus
NCBI taxonomy Id: 6210
Other names: E. granulosus, Echinococcus granulosus G1 strain, Echinococcus granulosus G2 strain, Echinococcus granulosus G3 strain, Echinococcus granulosus Tasmanian sheep strain, Echinococcus granulosus buffalo strain, Echinococcus granulosus s. s., Echinococcus granulosus sensu stricto, Echinococcus granulosus sheep strain
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.